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  5. AT1G13540

AT1G13540


Description : Protein of unknown function (DUF1262)


Gene families : OG0002947 (Archaeplastida) Phylogenetic Tree(s): OG0002947_tree ,
OG_05_0001982 (LandPlants) Phylogenetic Tree(s): OG_05_0001982_tree ,
OG_06_0001105 (SeedPlants) Phylogenetic Tree(s): OG_06_0001105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13540
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248680 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G13470 No alias Protein of unknown function (DUF1262) 0.07 Archaeplastida
AT1G13480 No alias Protein of unknown function (DUF1262) 0.05 Archaeplastida
AT1G13490 No alias Protein of unknown function (DUF1262) 0.04 Archaeplastida
AT1G13500 No alias Protein of unknown function (DUF1262) 0.07 Archaeplastida
AT1G13510 No alias Protein of unknown function (DUF1262) 0.07 Archaeplastida
AT1G61600 No alias Protein of unknown function (DUF1262) 0.03 Archaeplastida
GSVIVT01012025001 No alias No description available 0.04 Archaeplastida
GSVIVT01012026001 No alias No description available 0.05 Archaeplastida
Gb_01792 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22146 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22147 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g31850.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g31890.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_98223g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g010460.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e022372_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000303 response to superoxide IEP Neighborhood
BP GO:0000305 response to oxygen radical IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006984 ER-nucleus signaling pathway IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008559 xenobiotic transmembrane transporting ATPase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
MF GO:0009931 calcium-dependent protein serine/threonine kinase activity IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010043 response to zinc ion IEP Neighborhood
BP GO:0010045 response to nickel cation IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
MF GO:0010328 auxin influx transmembrane transporter activity IEP Neighborhood
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
MF GO:0010857 calcium-dependent protein kinase activity IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015562 efflux transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0031219 levanase activity IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051670 inulinase activity IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060919 auxin influx IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902456 regulation of stomatal opening IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR010683 DUF1262 23 124
No external refs found!