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  5. Zm00001e014827_P001

Zm00001e014827_P001


Description : TFC-C cofactor of post-CCT Tubulin folding pathway


Gene families : OG0006380 (Archaeplastida) Phylogenetic Tree(s): OG0006380_tree ,
OG_05_0006565 (LandPlants) Phylogenetic Tree(s): OG_05_0006565_tree ,
OG_06_0007202 (SeedPlants) Phylogenetic Tree(s): OG_06_0007202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014827_P001
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g35110.1 No alias TFC-C cofactor of post-CCT Tubulin folding pathway 0.03 Archaeplastida
MA_10437089g0010 No alias TFC-C cofactor of post-CCT Tubulin folding pathway 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015631 tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR031925 TBCC_N 39 132
IPR012945 Tubulin-bd_cofactor_C_dom 198 314
No external refs found!