AT3G20000 (TOM40)


Aliases : TOM40

Description : translocase of the outer mitochondrial membrane 40


Gene families : OG0003148 (Archaeplastida) Phylogenetic Tree(s): OG0003148_tree ,
OG_05_0003391 (LandPlants) Phylogenetic Tree(s): OG_05_0003391_tree ,
OG_06_0003798 (SeedPlants) Phylogenetic Tree(s): OG_06_0003798_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20000
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cre10.g424450 No alias Protein translocation.mitochondrion.outer mitochondrion... 0.02 Archaeplastida
GSVIVT01038525001 No alias Protein translocation.mitochondrion.outer mitochondrion... 0.1 Archaeplastida
Gb_29141 No alias component Tom40 of outer mitochondrion membrane TOM... 0.03 Archaeplastida
LOC_Os01g16910.1 No alias component Tom40 of outer mitochondrion membrane TOM... 0.2 Archaeplastida
MA_27666g0010 No alias component Tom40 of outer mitochondrion membrane TOM... 0.05 Archaeplastida
MA_891968g0010 No alias no hits & (original description: none) 0.13 Archaeplastida
Solyc06g007710.4.1 No alias component Tom40 of outer mitochondrion membrane TOM... 0.11 Archaeplastida
Solyc06g082793.1.1 No alias component Tom40 of outer mitochondrion membrane TOM... 0.11 Archaeplastida
Zm00001e001520_P001 No alias component Tom40 of outer mitochondrion membrane TOM... 0.03 Archaeplastida
Zm00001e025489_P003 No alias component Tom40 of outer mitochondrion membrane TOM... 0.12 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005741 mitochondrial outer membrane IDA Interproscan
CC GO:0005742 mitochondrial outer membrane translocase complex IPI Interproscan
CC GO:0005743 mitochondrial inner membrane IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
BP GO:0006364 rRNA processing RCA Interproscan
BP GO:0006626 protein targeting to mitochondrion ISS Interproscan
BP GO:0006626 protein targeting to mitochondrion RCA Interproscan
BP GO:0006820 anion transport ISS Interproscan
MF GO:0008308 voltage-gated anion channel activity ISS Interproscan
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Interproscan
BP GO:0009853 photorespiration RCA Interproscan
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Neighborhood
BP GO:0000741 karyogamy IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000987 proximal promoter sequence-specific DNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004152 dihydroorotate dehydrogenase activity IEP Neighborhood
MF GO:0004641 phosphoribosylformylglycinamidine cyclo-ligase activity IEP Neighborhood
MF GO:0004774 succinate-CoA ligase activity IEP Neighborhood
MF GO:0004776 succinate-CoA ligase (GDP-forming) activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005844 polysome IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006954 inflammatory response IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009955 adaxial/abaxial pattern specification IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
MF GO:0016018 cyclosporin A binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor IEP Neighborhood
MF GO:0016882 cyclo-ligase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0017126 nucleologenesis IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018195 peptidyl-arginine modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018216 peptidyl-arginine methylation IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0022625 cytosolic large ribosomal subunit IEP Neighborhood
CC GO:0022626 cytosolic ribosome IEP Neighborhood
CC GO:0022627 cytosolic small ribosomal subunit IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030686 90S preribosome IEP Neighborhood
CC GO:0031970 organelle envelope lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032870 cellular response to hormone stimulus IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0034969 histone arginine methylation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042274 ribosomal small subunit biogenesis IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042991 obsolete transcription factor import into nucleus IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043985 histone H4-R3 methylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048284 organelle fusion IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048569 post-embryonic animal organ development IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071310 cellular response to organic substance IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071495 cellular response to endogenous stimulus IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090069 regulation of ribosome biogenesis IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000232 regulation of rRNA processing IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 31 303
No external refs found!