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  5. Zm00001e015077_P001

Zm00001e015077_P001


Description : RSZ21/22 RNA splicing factor


Gene families : OG0002592 (Archaeplastida) Phylogenetic Tree(s): OG0002592_tree ,
OG_05_0002271 (LandPlants) Phylogenetic Tree(s): OG_05_0002271_tree ,
OG_06_0002305 (SeedPlants) Phylogenetic Tree(s): OG_06_0002305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015077_P001
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AT2G24590 At-RSZ22a, RSZ22a RNA recognition motif and CCHC-type zinc finger domains... 0.05 Archaeplastida
AT4G31580 RSZ22, At-RSZ22,... serine/arginine-rich 22 0.04 Archaeplastida
Cre09.g408200 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
GSVIVT01033172001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.07 Archaeplastida
Gb_16463 No alias RSZ21/22 RNA splicing factor 0.07 Archaeplastida
MA_10435943g0010 No alias RSZ21/22 RNA splicing factor 0.09 Archaeplastida
Pp3c7_5100V3.1 No alias serine/arginine-rich 22 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 86 101
IPR000504 RRM_dom 4 61
No external refs found!