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  5. Zm00001e015079_P001

Zm00001e015079_P001


Description : Protein TAB2 homolog, chloroplastic OS=Zea mays (sp|b4ftr7|atab2_maize : 593.0)


Gene families : OG0004666 (Archaeplastida) Phylogenetic Tree(s): OG0004666_tree ,
OG_05_0006446 (LandPlants) Phylogenetic Tree(s): OG_05_0006446_tree ,
OG_06_0006723 (SeedPlants) Phylogenetic Tree(s): OG_06_0006723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015079_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00115980 evm_27.TU.AmTr_v1... Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G08010 ATAB2 RNA binding 0.03 Archaeplastida
Cpa|evm.model.tig00000622.21 No alias Protein TAB2 homolog, chloroplastic OS=Zea mays 0.02 Archaeplastida
Cre17.g702500 No alias Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032129001 No alias Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.15 Archaeplastida
Gb_34984 No alias Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.09 Archaeplastida
Gb_34986 No alias Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.07 Archaeplastida
LOC_Os02g39740.1 No alias Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.17 Archaeplastida
MA_10430622g0010 No alias Protein TAB2 homolog, chloroplastic OS=Zea mays... 0.05 Archaeplastida
Pp3c5_6760V3.1 No alias RNA binding 0.03 Archaeplastida
Pp3c6_22710V3.1 No alias RNA binding 0.03 Archaeplastida
Solyc02g005200.4.1 No alias Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR009472 Tab2-like 108 382
No external refs found!