- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e015157_P001 | |
| Cluster | HCCA: Cluster_182 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00201680 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | Archaeplastida | |
| AMTR_s00148p00088930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.09 | Archaeplastida | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.03 | Archaeplastida | |
| AT3G53260 | ATPAL2, PAL2 | phenylalanine ammonia-lyase 2 | 0.1 | Archaeplastida | |
| GSVIVT01016257001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024292001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01025214001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01025703001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| Gb_21115 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Gb_25608 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| LOC_Os02g41650.3 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| LOC_Os04g43760.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| LOC_Os04g43800.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| LOC_Os05g35290.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| MA_123220g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| MA_632036g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Mp1g05190.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g14140.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp4g14170.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Pp3c13_9000V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Pp3c14_11870V3.1 | No alias | PHE ammonia lyase 1 | 0.02 | Archaeplastida | |
| Pp3c19_13690V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Pp3c1_18830V3.1 | No alias | PHE ammonia lyase 1 | 0.02 | Archaeplastida | |
| Pp3c1_18940V3.1 | No alias | PHE ammonia lyase 1 | 0.03 | Archaeplastida | |
| Pp3c2_30610V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Solyc05g056170.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Solyc09g007910.4.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc10g011925.1.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc10g086180.2.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Zm00001e007573_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.15 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 63 | 530 |
| No external refs found! |