Zm00001e015260_P001


Description : transcription factor (GATA)


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0013078 (LandPlants) Phylogenetic Tree(s): OG_05_0013078_tree ,
OG_06_0020783 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015260_P001
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00011p00253850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
AMTR_s00039p00112210 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00057p00121410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00064p00107710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT2G18380 GATA20 GATA transcription factor 20 0.03 Archaeplastida
AT2G45050 GATA2 GATA transcription factor 2 0.04 Archaeplastida
AT3G24050 GATA1 GATA transcription factor 1 0.03 Archaeplastida
AT3G50870 HAN, MNP, GATA18 GATA type zinc finger transcription factor family protein 0.04 Archaeplastida
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.04 Archaeplastida
AT5G26930 GATA23 GATA transcription factor 23 0.04 Archaeplastida
AT5G49300 GATA16 GATA transcription factor 16 0.03 Archaeplastida
AT5G66320 GATA5 GATA transcription factor 5 0.02 Archaeplastida
GSVIVT01016265001 No alias GATA transcription factor 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01017011001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01018180001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01033385001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_13387 No alias transcription factor (GATA) 0.02 Archaeplastida
Gb_25568 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os01g24070.1 No alias transcription factor (GATA) 0.01 Archaeplastida
LOC_Os01g47360.1 No alias transcription factor (GATA) 0.05 Archaeplastida
LOC_Os02g43150.1 No alias transcription factor (GATA) 0.08 Archaeplastida
LOC_Os02g56250.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os04g45650.2 No alias transcription factor (GATA) 0.12 Archaeplastida
LOC_Os05g44400.1 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os05g49280.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os05g50270.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os06g37450.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os09g08150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g32070.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os10g40810.1 No alias transcription factor (GATA) 0.06 Archaeplastida
LOC_Os12g07120.1 No alias transcription factor (GATA) 0.05 Archaeplastida
MA_103421g0030 No alias transcription factor (GATA) 0.03 Archaeplastida
MA_10436047g0010 No alias transcription factor (GATA) 0.03 Archaeplastida
MA_120821g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_18616g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
Pp3c20_22630V3.1 No alias GATA transcription factor 9 0.01 Archaeplastida
Pp3c21_15110V3.1 No alias GATA transcription factor 19 0.01 Archaeplastida
Pp3c22_11040V3.1 No alias GATA transcription factor 19 0.02 Archaeplastida
Solyc01g090760.4.1 No alias transcription factor (GATA) 0.01 Archaeplastida
Solyc02g062760.4.1 No alias transcription factor (GATA) 0.04 Archaeplastida
Solyc02g085190.2.1 No alias transcription factor (GATA) 0.08 Archaeplastida
Solyc03g033660.4.1 No alias transcription factor (GATA) 0.07 Archaeplastida
Solyc04g015360.3.1 No alias transcription factor (GATA) 0.04 Archaeplastida
Solyc05g053500.4.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc05g056120.3.1 No alias transcription factor (GATA) 0.04 Archaeplastida
Solyc08g066510.3.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e007391_P002 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e018438_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e026601_P001 No alias transcription factor (GATA) 0.04 Archaeplastida
Zm00001e032219_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e032513_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038971_P001 No alias transcription factor (GATA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000679 Znf_GATA 305 339
No external refs found!