Zm00001e015414_P004

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0012335 (SeedPlants) Phylogenetic Tree(s): OG_06_0012335_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e015414_P004
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.09	Archaeplastida
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.07	Archaeplastida
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00080p00087770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
AMTR_s00169p00055880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT1G07640	OBP2	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT1G47655	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G28510	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.08	Archaeplastida
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.07	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.07	Archaeplastida
AT3G55370	OBP3	OBF-binding protein 3	0.07	Archaeplastida
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT4G00940	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.07	Archaeplastida
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.05	Archaeplastida
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.06	Archaeplastida
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G66940	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
GSVIVT01002242001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
GSVIVT01005057001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.09	Archaeplastida
GSVIVT01007758001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01011138001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
GSVIVT01016538001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.07	Archaeplastida
GSVIVT01016887001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01021212001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.08	Archaeplastida
GSVIVT01034189001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01038591001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.02	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os01g09720.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os01g15900.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g48290.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g64590.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g07360.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os04g58190.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os05g36900.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os07g13260.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os08g38220.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os10g26620.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
MA_16692g0010	No alias	transcription factor (DOF)	0.04	Archaeplastida
MA_459791g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_56828g0010	No alias	transcription factor (DOF)	0.05	Archaeplastida
MA_74014g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_939289g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_97259g0020	No alias	transcription factor (DOF)	0.01	Archaeplastida
Mp1g18540.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c16_6460V3.1	No alias	cycling DOF factor 2	0.04	Archaeplastida
Pp3c17_23300V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c17_3860V3.1	No alias	OBF binding protein 4	0.03	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Smo29563	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Smo29617	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Smo89924	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Solyc02g077950.3.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
Solyc02g077960.3.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
Solyc02g090220.3.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc03g082840.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.13	Archaeplastida
Solyc03g115940.4.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g121400.1.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc06g062520.1.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc06g071480.3.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
Solyc08g082910.2.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.1	Archaeplastida
Solyc10g009360.4.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.12	Archaeplastida
Solyc11g066050.1.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc11g072500.2.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e012437_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e019172_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e032133_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	128	184

External Links

No external refs found!

Zm00001e015414_P004

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation