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  5. Zm00001e015506_P002

Zm00001e015506_P002


Description : E3 ubiquitin ligase (ARA54)


Gene families : OG0002913 (Archaeplastida) Phylogenetic Tree(s): OG0002913_tree ,
OG_05_0002645 (LandPlants) Phylogenetic Tree(s): OG_05_0002645_tree ,
OG_06_0018094 (SeedPlants) Phylogenetic Tree(s): OG_06_0018094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015506_P002

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g50720.1 No alias E3 ubiquitin ligase (ARA54) 0.02 Archaeplastida
LOC_Os04g50730.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10433169g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR002867 IBR_dom 320 377
IPR002867 IBR_dom 417 457
IPR006575 RWD-domain 55 192
No external refs found!