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  5. Zm00001e015514_P001

Zm00001e015514_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000453 (SeedPlants) Phylogenetic Tree(s): OG_06_0000453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015514_P001
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00089p00057120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.03 Archaeplastida
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015900001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026319001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029458001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
LOC_Os03g55760.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os04g47890.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os04g56990.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g06370.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
LOC_Os09g23200.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os10g39550.1 No alias G2-like GARP transcription factor 0.11 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_201937g0020 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_218023g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6619111g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Mp4g08700.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Pp3c13_9170V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_34700V3.1 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c7_20870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo270428 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo414222 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Solyc04g079600.3.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc08g005260.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc08g076400.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e000237_P002 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e001526_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e003093_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e021698_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 184 235
No external refs found!