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  5. Zm00001e015525_P002

Zm00001e015525_P002


Description : no hits & (original description: none)


Gene families : OG0002755 (Archaeplastida) Phylogenetic Tree(s): OG0002755_tree ,
OG_05_0002363 (LandPlants) Phylogenetic Tree(s): OG_05_0002363_tree ,
OG_06_0002373 (SeedPlants) Phylogenetic Tree(s): OG_06_0002373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015525_P002
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00246950 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.04 Archaeplastida
AMTR_s00103p00060940 evm_27.TU.AmTr_v1... Cell division cycle protein 48 homolog OS=Glycine max 0.03 Archaeplastida
AT2G18330 No alias AAA-type ATPase family protein 0.03 Archaeplastida
AT3G03060 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G16930 No alias AAA-type ATPase family protein 0.06 Archaeplastida
Cre03.g144967 No alias No description available 0.05 Archaeplastida
GSVIVT01018945001 No alias Cell division control protein 48 homolog D... 0.03 Archaeplastida
GSVIVT01024407001 No alias 26S proteasome regulatory subunit 6A homolog OS=Solanum... 0.04 Archaeplastida
Gb_39829 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g46990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_24945g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g01020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c5_16820V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
Smo168159 No alias 26S proteasome regulatory subunit 6B homolog... 0.04 Archaeplastida
Solyc02g062700.3.1 No alias Cell division control protein 48 homolog D... 0.08 Archaeplastida
Solyc03g097020.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0030490 maturation of SSU-rRNA IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR021911 DUF3523 64 332
IPR003959 ATPase_AAA_core 402 528
No external refs found!