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  5. Zm00001e015701_P001

Zm00001e015701_P001


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015701_P001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00058p00210070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
GSVIVT01016887001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01019969001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Gb_07177 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.01 Archaeplastida
Pp3c12_22390V3.1 No alias cycling DOF factor 3 0.01 Archaeplastida
Pp3c16_6460V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc11g066050.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e029641_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 49 104
No external refs found!