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  5. AT3G20710

AT3G20710


Description : F-box family protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20710
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT1G32140 No alias F-box family protein 0.07 Archaeplastida
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.08 Archaeplastida
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G17500 No alias F-box family protein 0.07 Archaeplastida
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G18330 No alias F-box family protein 0.03 Archaeplastida
AT3G19560 No alias F-box family protein 0.05 Archaeplastida
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G21165 No alias No description available 0.05 Archaeplastida
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.11 Archaeplastida
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT5G51000 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0007131 reciprocal meiotic recombination RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009827 plant-type cell wall modification RCA Interproscan
BP GO:0009860 pollen tube growth RCA Interproscan
BP GO:0031048 chromatin silencing by small RNA RCA Interproscan
BP GO:0033044 regulation of chromosome organization RCA Interproscan
BP GO:0042138 meiotic DNA double-strand break formation RCA Interproscan
BP GO:0045132 meiotic chromosome segregation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0048868 pollen tube development IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 42
IPR006527 F-box-assoc_dom_typ1 197 361
No external refs found!