Zm00001e015908_P001


Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0000806 (LandPlants) Phylogenetic Tree(s): OG_05_0000806_tree ,
OG_06_0000796 (SeedPlants) Phylogenetic Tree(s): OG_06_0000796_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015908_P001
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.03 Archaeplastida
AT5G49980 AFB5 auxin F-box protein 5 0.03 Archaeplastida
GSVIVT01000962001 No alias Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016368001 No alias Phytohormones.jasmonic acid.perception and signal... 0.04 Archaeplastida
LOC_Os03g08850.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.05 Archaeplastida
LOC_Os04g32460.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.08 Archaeplastida
MA_15842g0020 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_372199g0010 No alias No annotation 0.02 Archaeplastida
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_646265g0010 No alias Coronatine-insensitive protein homolog 1a OS=Oryza... 0.03 Archaeplastida
MA_78902g0010 No alias component TIR1/AFB of auxin receptor complex 0.03 Archaeplastida
Mp2g26590.1 No alias component COI of jasmonic acid receptor complex 0.02 Archaeplastida
Pp3c18_16630V3.1 No alias GRR1-like protein 1 0.02 Archaeplastida
Pp3c23_18960V3.1 No alias RNI-like superfamily protein 0.03 Archaeplastida
Pp3c9_10120V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Smo168175 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo75487 No alias Phytohormones.jasmonic acid.perception and signal... 0.02 Archaeplastida
Solyc09g074520.3.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Zm00001e038515_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038839_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!