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AT3G20997 (LCR55)


Aliases : LCR55

Description : low-molecular-weight cysteine-rich 55


Gene families : OG0009463 (Archaeplastida) Phylogenetic Tree(s): OG0009463_tree ,
OG_05_0009493 (LandPlants) Phylogenetic Tree(s): OG_05_0009493_tree ,
OG_06_0007071 (SeedPlants) Phylogenetic Tree(s): OG_06_0007071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20997
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G10535 LCR29 low-molecular-weight cysteine-rich 29 0.04 Archaeplastida
AT3G43505 LCR30 low-molecular-weight cysteine-rich 30 0.06 Archaeplastida
AT3G61172 LCR8 low-molecular-weight cysteine-rich 8 0.08 Archaeplastida
AT3G61175 LCR52 low-molecular-weight cysteine-rich 52 0.06 Archaeplastida
AT3G61177 LCR53 low-molecular-weight cysteine-rich 53 0.08 Archaeplastida
AT4G09795 LCR13 low-molecular-weight cysteine-rich 13 0.04 Archaeplastida
AT5G47075 LCR20 low-molecular-weight cysteine-rich 20 0.07 Archaeplastida
AT5G47175 LCR3 low-molecular-weight cysteine-rich 3 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0031221 arabinan metabolic process IEP Neighborhood
BP GO:0031222 arabinan catabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR010851 SLR1_pollen-bd 22 74
No external refs found!