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  5. Zm00001e016153_P002

Zm00001e016153_P002


Description : regulatory component RPT5 of 26S proteasome


Gene families : OG0003943 (Archaeplastida) Phylogenetic Tree(s): OG0003943_tree ,
OG_05_0003993 (LandPlants) Phylogenetic Tree(s): OG_05_0003993_tree ,
OG_06_0004428 (SeedPlants) Phylogenetic Tree(s): OG_06_0004428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016153_P002
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT1G09100 RPT5B 26S proteasome AAA-ATPase subunit RPT5B 0.07 Archaeplastida
AT3G05530 RPT5A, ATS6A.2 regulatory particle triple-A ATPase 5A 0.03 Archaeplastida
Cpa|evm.model.tig00001187.20 No alias 26S proteasome regulatory subunit 6A homolog OS=Oryza... 0.04 Archaeplastida
Cre10.g439150 No alias Protein degradation.26S proteasome.regulatory... 0.11 Archaeplastida
GSVIVT01017724001 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
Gb_01340 No alias regulatory component RPT5 of 26S proteasome 0.03 Archaeplastida
LOC_Os02g56000.1 No alias regulatory component RPT5 of 26S proteasome 0.09 Archaeplastida
LOC_Os06g07630.1 No alias regulatory component RPT5 of 26S proteasome 0.05 Archaeplastida
Mp3g09490.1 No alias regulatory component RPT5 of 26S proteasome 0.09 Archaeplastida
Pp3c25_4190V3.1 No alias regulatory particle triple-A ATPase 5A 0.03 Archaeplastida
Pp3c5_21920V3.1 No alias regulatory particle triple-A ATPase 5A 0.08 Archaeplastida
Smo74992 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
Solyc01g099760.3.1 No alias regulatory component RPT5 of 26S proteasome 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 288 420
IPR032501 Prot_ATP_ID_OB 154 230
No external refs found!