1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e016179_P001

Zm00001e016179_P001


Description : Protein argonaute MEL1 OS=Oryza sativa subsp. japonica (sp|q851r2|mel1_orysj : 221.0)


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0006103 (LandPlants) Phylogenetic Tree(s): OG_05_0006103_tree ,
OG_06_0008925 (SeedPlants) Phylogenetic Tree(s): OG_06_0008925_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016179_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00265690 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
AMTR_s00044p00049370 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
AT1G31290 AGO3 ARGONAUTE 3 0.04 Archaeplastida
Gb_13708 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 Archaeplastida
Gb_20550 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 Archaeplastida
MA_134260g0010 No alias Protein argonaute 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_14457g0020 No alias Protein argonaute 4B OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c19_20670V3.1 No alias Argonaute family protein 0.02 Archaeplastida
Solyc01g010970.3.1 No alias Protein argonaute 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g073540.4.1 No alias siRNA-integrating factor (AGO) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR003165 Piwi 2 118
No external refs found!