Description : ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin carboxyl-terminal hydrolase (UCH1|2). ubiquitin C-terminal hydrolase cofactor
Gene families : OG0004421 (Archaeplastida) Phylogenetic Tree(s): OG0004421_tree ,
OG_05_0005369 (LandPlants) Phylogenetic Tree(s): OG_05_0005369_tree ,
OG_06_0005286 (SeedPlants) Phylogenetic Tree(s): OG_06_0005286_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e016258_P005 | |
Cluster | HCCA: Cluster_346 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001085.16 | No alias | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.04 | Archaeplastida | |
Gb_38805 | No alias | ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin... | 0.02 | Archaeplastida | |
LOC_Os02g08370.1 | No alias | ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin... | 0.02 | Archaeplastida | |
Mp4g14320.1 | No alias | ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin... | 0.03 | Archaeplastida | |
Smo231325 | No alias | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEA | Interproscan |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Neighborhood |
MF | GO:0016874 | ligase activity | IEP | Neighborhood |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001578 | Peptidase_C12_UCH | 3 | 205 |
No external refs found! |