AT3G21295


Description : Tudor/PWWP/MBT superfamily protein


Gene families : OG0002659 (Archaeplastida) Phylogenetic Tree(s): OG0002659_tree ,
OG_05_0001694 (LandPlants) Phylogenetic Tree(s): OG_05_0001694_tree ,
OG_06_0001018 (SeedPlants) Phylogenetic Tree(s): OG_06_0001018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G21295
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016893001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
GSVIVT01024445001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003727 single-stranded RNA binding IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005956 protein kinase CK2 complex IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006409 tRNA export from nucleus IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006896 Golgi to vacuole transport IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
BP GO:0010026 trichome differentiation IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010482 regulation of epidermal cell division IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030133 transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
CC GO:0030136 clathrin-coated vesicle IEP Neighborhood
CC GO:0030140 trans-Golgi network transport vesicle IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045324 late endosome to vacuole transport IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0051031 tRNA transport IEP Neighborhood
BP GO:0051568 histone H3-K4 methylation IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0097064 ncRNA export from nucleus IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000313 PWWP_dom 15 107
No external refs found!