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  5. Zm00001e016376_P001

Zm00001e016376_P001


Description : SINA-class E3 ligase


Gene families : OG0000967 (Archaeplastida) Phylogenetic Tree(s): OG0000967_tree ,
OG_05_0000653 (LandPlants) Phylogenetic Tree(s): OG_05_0000653_tree ,
OG_06_0000482 (SeedPlants) Phylogenetic Tree(s): OG_06_0000482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016376_P001
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00156470 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00021p00235650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
AMTR_s00029p00125110 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AT5G53360 No alias TRAF-like superfamily protein 0.03 Archaeplastida
GSVIVT01025381001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os01g13370.1 No alias SINA-class E3 ligase 0.17 Archaeplastida
LOC_Os02g03620.1 No alias SINA-class E3 ligase 0.02 Archaeplastida
LOC_Os07g46560.1 No alias SINA-class E3 ligase 0.03 Archaeplastida
MA_9566834g0010 No alias SINA-class E3 ligase 0.02 Archaeplastida
Mp3g21220.1 No alias SINA-class E3 ligase 0.02 Archaeplastida
Pp3c3_35340V3.1 No alias Protein with RING/U-box and TRAF-like domains 0.03 Archaeplastida
Pp3c8_2090V3.1 No alias Protein with RING/U-box and TRAF-like domains 0.02 Archaeplastida
Solyc01g006190.3.1 No alias SINA-class E3 ligase 0.03 Archaeplastida
Solyc03g083270.4.1 No alias No annotation 0.09 Archaeplastida
Solyc05g050580.3.1 No alias SINA-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0007275 multicellular organism development IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 184 383
No external refs found!