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  5. Zm00001e016394_P001

Zm00001e016394_P001


Description : component RPS15a of SSU proteome


Gene families : OG0001596 (Archaeplastida) Phylogenetic Tree(s): OG0001596_tree ,
OG_05_0001709 (LandPlants) Phylogenetic Tree(s): OG_05_0001709_tree ,
OG_06_0002630 (SeedPlants) Phylogenetic Tree(s): OG_06_0002630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016394_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00192110 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
AT1G07770 RPS15A ribosomal protein S15A 0.23 Archaeplastida
AT3G46040 RPS15AD ribosomal protein S15A D 0.26 Archaeplastida
AT5G59850 No alias Ribosomal protein S8 family protein 0.33 Archaeplastida
Cpa|evm.model.tig00000158.110 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.31 Archaeplastida
Cre05.g234637 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.36 Archaeplastida
GSVIVT01016595001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.35 Archaeplastida
GSVIVT01025622001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
Gb_08537 No alias component RPS15a of SSU proteome 0.18 Archaeplastida
Gb_37191 No alias component RPS15a of SSU proteome 0.03 Archaeplastida
LOC_Os02g27760.1 No alias component RPS15a of SSU proteome 0.33 Archaeplastida
LOC_Os07g10720.1 No alias component RPS15a of SSU proteome 0.46 Archaeplastida
MA_10427318g0020 No alias component RPS15a of SSU proteome 0.21 Archaeplastida
MA_57835g0010 No alias component RPS15a of SSU proteome 0.24 Archaeplastida
MA_82191g0010 No alias component RPS15a of SSU proteome 0.12 Archaeplastida
Mp8g06510.1 No alias component RPS15a of SSU proteome 0.41 Archaeplastida
Mp8g13010.1 No alias component RPS15a of SSU proteome 0.43 Archaeplastida
Pp3c11_10490V3.1 No alias Ribosomal protein S8 family protein 0.1 Archaeplastida
Pp3c1_4290V3.1 No alias Ribosomal protein S8 family protein 0.35 Archaeplastida
Pp3c2_32050V3.1 No alias Ribosomal protein S8 family protein 0.29 Archaeplastida
Pp3c3_1140V3.1 No alias ribosomal protein S15A 0.22 Archaeplastida
Pp3c4_27540V3.1 No alias Ribosomal protein S8 family protein 0.33 Archaeplastida
Pp3c5_5750V3.1 No alias ribosomal protein S15A 0.14 Archaeplastida
Smo228163 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
Solyc04g150158.1.1 No alias component RPS15a of SSU proteome 0.31 Archaeplastida
Solyc04g150159.1.1 No alias component RPS15a of SSU proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!