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  5. Zm00001e016459_P001

Zm00001e016459_P001


Description : Protein trichome birefringence-like 38 OS=Arabidopsis thaliana (sp|q8vy22|tbl38_arath : 328.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016459_P001
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00122990 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00021p00125740 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G06080 TBL10 Plant protein of unknown function (DUF828) 0.06 Archaeplastida
GSVIVT01014107001 No alias Protein trichome birefringence-like 41 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01020678001 No alias Protein trichome birefringence-like 39 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os01g11810.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os05g35190.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g052450.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc06g007170.4.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc06g082070.3.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 92 142
IPR026057 PC-Esterase 149 420
No external refs found!