1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e016768_P001

Zm00001e016768_P001


Description : group-II intron mitochondrial splicing factor (MISF26)


Gene families : OG0009135 (Archaeplastida) Phylogenetic Tree(s): OG0009135_tree ,
OG_05_0009415 (LandPlants) Phylogenetic Tree(s): OG_05_0009415_tree ,
OG_06_0001824 (SeedPlants) Phylogenetic Tree(s): OG_06_0001824_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016768_P001
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Gb_13926 No alias group-II intron mitochondrial splicing factor (MISF26) 0.05 Archaeplastida
LOC_Os01g07610.1 No alias group-II intron mitochondrial splicing factor (MISF26) 0.03 Archaeplastida
Smo403786 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 349 377
IPR002885 Pentatricopeptide_repeat 384 413
IPR002885 Pentatricopeptide_repeat 525 551
IPR002885 Pentatricopeptide_repeat 314 342
IPR002885 Pentatricopeptide_repeat 483 514
IPR002885 Pentatricopeptide_repeat 416 463
No external refs found!