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  5. Zm00001e017128_P002

Zm00001e017128_P002


Description : regulatory protein (CORD) of cortical microtubule organisation


Gene families : OG0000477 (Archaeplastida) Phylogenetic Tree(s): OG0000477_tree ,
OG_05_0008044 (LandPlants) Phylogenetic Tree(s): OG_05_0008044_tree ,
OG_06_0004536 (SeedPlants) Phylogenetic Tree(s): OG_06_0004536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017128_P002
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00171710 evm_27.TU.AmTr_v1... No description available 0.1 Archaeplastida
AMTR_s00077p00183470 evm_27.TU.AmTr_v1... No description available 0.12 Archaeplastida
AMTR_s00164p00057870 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G23790 No alias Plant protein of unknown function (DUF936) 0.07 Archaeplastida
AT3G14170 No alias Plant protein of unknown function (DUF936) 0.05 Archaeplastida
AT4G13370 No alias Plant protein of unknown function (DUF936) 0.08 Archaeplastida
GSVIVT01005996001 No alias No description available 0.02 Archaeplastida
GSVIVT01015437001 No alias No description available 0.13 Archaeplastida
GSVIVT01016707001 No alias No description available 0.02 Archaeplastida
GSVIVT01020241001 No alias No description available 0.13 Archaeplastida
Gb_37688 No alias regulatory protein (CORD) of cortical microtubule organisation 0.08 Archaeplastida
Gb_38624 No alias regulatory protein (CORD) of cortical microtubule organisation 0.04 Archaeplastida
LOC_Os01g01890.1 No alias no hits & (original description: none) 0.21 Archaeplastida
LOC_Os11g02740.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.11 Archaeplastida
LOC_Os11g37480.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g02710.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.15 Archaeplastida
MA_134781g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.09 Archaeplastida
MA_39811g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.02 Archaeplastida
MA_7104g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8827g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.06 Archaeplastida
MA_88653g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.03 Archaeplastida
Mp5g18740.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.02 Archaeplastida
Pp3c11_800V3.1 No alias Plant protein of unknown function (DUF936) 0.03 Archaeplastida
Pp3c1_38260V3.1 No alias Plant protein of unknown function (DUF936) 0.02 Archaeplastida
Pp3c2_28590V3.1 No alias Plant protein of unknown function (DUF936) 0.02 Archaeplastida
Pp3c2_3720V3.1 No alias Plant protein of unknown function (DUF936) 0.02 Archaeplastida
Pp3c7_26930V3.1 No alias Plant protein of unknown function (DUF936) 0.02 Archaeplastida
Smo84972 No alias No description available 0.03 Archaeplastida
Solyc05g005580.3.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.11 Archaeplastida
Solyc12g007020.2.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR010341 DUF936_pln 191 544
IPR010341 DUF936_pln 4 297
No external refs found!