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  5. Zm00001e017221_P001

Zm00001e017221_P001


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017221_P001
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00022p00153780 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00119p00058870 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.04 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.04 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.04 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.02 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.02 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.04 Archaeplastida
AT3G55500 EXPA16, ATHEXP... expansin A16 0.02 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.06 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.02 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.03 Archaeplastida
GSVIVT01000214001 No alias Phytohormones.signalling peptides.NCRP... 0.04 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01014362001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01030191001 No alias Expansin-A8 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01032935001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Gb_01499 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01504 No alias alpha-class expansin 0.03 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.06 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.04 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os03g06010.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.08 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g60720.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10299189g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_104065g0020 No alias alpha-class expansin 0.03 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.03 Archaeplastida
MA_10434805g0030 No alias alpha-class expansin 0.03 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_12056g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_19117g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_200461g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_40671g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g09650.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g10120.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp5g20430.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c13_8440V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.03 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.03 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.04 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e029218_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 159 236
IPR009009 RlpA-like_DPBB 61 148
No external refs found!