Description : GTPase (Sar1)

Gene families : OG0001825 (Archaeplastida) Phylogenetic Tree(s): OG0001825_tree ,
OG_05_0001675 (LandPlants) Phylogenetic Tree(s): OG_05_0001675_tree ,
OG_06_0001948 (SeedPlants) Phylogenetic Tree(s): OG_06_0001948_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Zm00001e017247_P001
Cluster HCCA: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031224001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
LOC_Os01g15010.1 No alias GTPase (Sar1) 0.03 Archaeplastida
LOC_Os01g23620.1 No alias GTPase (Sar1) 0.04 Archaeplastida
Mp2g15910.1 No alias GTPase (Sar1) 0.02 Archaeplastida
Pp3c20_15600V3.1 No alias secretion-associated RAS super family 2 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 192
No external refs found!