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  5. Zm00001e017349_P001

Zm00001e017349_P001


Description : transcription factor (BSD)


Gene families : OG0003448 (Archaeplastida) Phylogenetic Tree(s): OG0003448_tree ,
OG_05_0004041 (LandPlants) Phylogenetic Tree(s): OG_05_0004041_tree ,
OG_06_0004171 (SeedPlants) Phylogenetic Tree(s): OG_06_0004171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017349_P001
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000459.36 No alias RNA biosynthesis.transcriptional activation.BSD... 0.02 Archaeplastida
GSVIVT01011067001 No alias RNA biosynthesis.transcriptional activation.BSD... 0.03 Archaeplastida
LOC_Os01g16670.1 No alias transcription factor (BSD) 0.06 Archaeplastida
Solyc01g080340.3.1 No alias No annotation 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
InterPro domains Description Start Stop
IPR005607 BSD_dom 356 412
No external refs found!