Zm00001e017444_P002

Description : subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000418 (LandPlants) Phylogenetic Tree(s): OG_05_0000418_tree ,
OG_06_0000295 (SeedPlants) Phylogenetic Tree(s): OG_06_0000295_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e017444_P002
Cluster	HCCA: Cluster_288

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00076p00195870	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT3G28345	No alias	ABC transporter family protein	0.03	Archaeplastida
AT3G28390	PGP18	P-glycoprotein 18	0.02	Archaeplastida
AT3G55320	PGP20	P-glycoprotein 20	0.02	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.04	Archaeplastida
AT4G01830	PGP5	P-glycoprotein 5	0.03	Archaeplastida
AT4G18050	PGP9	P-glycoprotein 9	0.04	Archaeplastida
GSVIVT01028256001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_08702	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_10215	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_11202	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_27347	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_32487	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_36503	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
LOC_Os01g34970.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g50160.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
LOC_Os05g47500.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_111099g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_138894g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp1g26440.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp2g02910.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Pp3c14_2470V3.1	No alias	ABC transporter family protein	0.02	Archaeplastida
Pp3c17_16450V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c6_7260V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c9_13390V3.1	No alias	P-glycoprotein 6	0.04	Archaeplastida
Smo148837	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo230688	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo410515	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc03g093650.3.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc06g009290.4.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e023274_P001	No alias	subfamily ABCB transporter	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004357	glutamate-cysteine ligase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	1105	1253
IPR011527	ABC1_TM_dom	118	392
IPR011527	ABC1_TM_dom	764	1033
IPR003439	ABC_transporter-like	461	608

External Links

No external refs found!

Zm00001e017444_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation