Description : Polygalacturonase At1g48100 OS=Arabidopsis thaliana (sp|q949z1|pglr4_arath : 427.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 190.5)
Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000636 (LandPlants) Phylogenetic Tree(s): OG_05_0000636_tree ,
OG_06_0002274 (SeedPlants) Phylogenetic Tree(s): OG_06_0002274_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e017465_P001 | |
Cluster | HCCA: Cluster_179 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00197480 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
AMTR_s00074p00182020 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
AT1G56710 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT1G65570 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT2G43870 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT3G57510 | ADPG1 | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT5G44830 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01004007001 | No alias | Polygalacturonase OS=Prunus persica | 0.06 | Archaeplastida | |
GSVIVT01013800001 | No alias | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
GSVIVT01017302001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01017644001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
GSVIVT01028189001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01031298001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
GSVIVT01032114001 | No alias | Polygalacturonase OS=Actinidia deliciosa | 0.03 | Archaeplastida | |
GSVIVT01032117001 | No alias | Cell wall.pectin.modification and... | 0.02 | Archaeplastida | |
GSVIVT01033364001 | No alias | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
GSVIVT01038243001 | No alias | Polygalacturonase OS=Prunus persica | 0.02 | Archaeplastida | |
LOC_Os01g44970.1 | No alias | polygalacturonase (PGX1) | 0.02 | Archaeplastida | |
LOC_Os03g59330.1 | No alias | polygalacturonase (QRT2) | 0.03 | Archaeplastida | |
MA_101764g0010 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
MA_10862g0010 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | Archaeplastida | |
MA_9231294g0010 | No alias | No annotation | 0.04 | Archaeplastida | |
Smo111266 | No alias | Polygalacturonase OS=Chamaecyparis obtusa | 0.02 | Archaeplastida | |
Solyc01g100980.4.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc02g067640.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc03g113230.3.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.04 | Archaeplastida | |
Solyc04g025440.3.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Solyc08g014540.1.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc08g014560.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.02 | Archaeplastida | |
Solyc09g098270.4.1 | No alias | No annotation | 0.05 | Archaeplastida | |
Solyc12g009420.3.1 | No alias | Polygalacturonase QRT2 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc12g019130.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
Solyc12g019180.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.02 | Archaeplastida | |
Zm00001e020373_P001 | No alias | polygalacturonase (PGX1) | 0.04 | Archaeplastida | |
Zm00001e032294_P001 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 129 | 453 |
No external refs found! |