Description : pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0008035 (SeedPlants) Phylogenetic Tree(s): OG_06_0008035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e017514_P001 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00033p00227850 | evm_27.TU.AmTr_v1... | Probable pectinesterase/pectinesterase inhibitor 21... | 0.04 | Archaeplastida | |
AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00105p00078750 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00129p00033080 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00129p00047530 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00070300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00129p00073090 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT1G53840 | PME1, ATPME1 | pectin methylesterase 1 | 0.04 | Archaeplastida | |
AT2G43050 | ATPMEPCRD | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT2G45220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT2G47550 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.07 | Archaeplastida | |
AT3G10710 | RHS12 | root hair specific 12 | 0.03 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.02 | Archaeplastida | |
AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT4G33220 | PME44, ATPME44 | pectin methylesterase 44 | 0.03 | Archaeplastida | |
AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G20860 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G51490 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
GSVIVT01015000001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01018620001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01018622001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01027356001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028040001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01028264001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01035108001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01037344001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01037348001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01037349001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01037352001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01038546001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Gb_01424 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_05254 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Gb_15174 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_21388 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_24214 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_24564 | No alias | pectin methylesterase | 0.01 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_36012 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os01g13320.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os01g15039.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os01g20980.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os01g57854.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g18650.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os03g18860.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os04g38560.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os06g09340.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os08g34900.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os11g07090.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os11g08750.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os11g36240.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_10372207g0010 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_10377619g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_10430460g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_10434786g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
MA_10435891g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_130858g0010 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_133919g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_158002g0020 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_177306g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_18093g0010 | No alias | Pectinesterase 2.1 OS=Solanum lycopersicum... | 0.03 | Archaeplastida | |
MA_2017g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_354248g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_51464g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_648837g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_84680g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_86577g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_96515g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp6g15150.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.06 | Archaeplastida | |
Pp3c15_12280V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
Pp3c18_22120V3.1 | No alias | pectin methylesterase PCR fragment F | 0.02 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c21_22110V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo114014 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
Smo154356 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Smo266995 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Smo89509 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc02g080220.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc03g078100.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083840.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc03g123620.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc03g123630.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc07g064170.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc07g064180.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc07g064190.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e004056_P002 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e006791_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e017515_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e019069_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e025576_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e035932_P003 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006417 | regulation of translation | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
BP | GO:0008037 | cell recognition | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
BP | GO:0009690 | cytokinin metabolic process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0010817 | regulation of hormone levels | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
BP | GO:0017148 | negative regulation of translation | IEP | Neighborhood |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
BP | GO:0022414 | reproductive process | IEP | Neighborhood |
MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
MF | GO:0030597 | RNA glycosylase activity | IEP | Neighborhood |
MF | GO:0030598 | rRNA N-glycosylase activity | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0032269 | negative regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0042445 | hormone metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
BP | GO:0048544 | recognition of pollen | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No external refs found! |