Aliases : TIC
Description : time for coffee
Gene families : OG0008373 (Archaeplastida) Phylogenetic Tree(s): OG0008373_tree ,
OG_05_0007356 (LandPlants) Phylogenetic Tree(s): OG_05_0007356_tree ,
OG_06_0004470 (SeedPlants) Phylogenetic Tree(s): OG_06_0004470_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT3G22380 | |
Cluster | HCCA: Cluster_199 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00066p00076200 | evm_27.TU.AmTr_v1... | Multi-process regulation.circadian clock.TIC circadian... | 0.08 | Archaeplastida | |
GSVIVT01001149001 | No alias | Multi-process regulation.circadian clock.TIC circadian... | 0.04 | Archaeplastida | |
GSVIVT01017938001 | No alias | Multi-process regulation.circadian clock.TIC circadian... | 0.09 | Archaeplastida | |
Gb_04775 | No alias | circadian clock regulator (TIC) | 0.08 | Archaeplastida | |
MA_41397g0010 | No alias | circadian clock regulator (TIC) | 0.03 | Archaeplastida | |
Solyc09g075830.3.1 | No alias | circadian clock regulator (TIC) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0009639 | response to red or far red light | RCA | Interproscan |
BP | GO:0042752 | regulation of circadian rhythm | IMP | Interproscan |
BP | GO:0042752 | regulation of circadian rhythm | RCA | Interproscan |
BP | GO:0048574 | long-day photoperiodism, flowering | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
BP | GO:0000902 | cell morphogenesis | IEP | Neighborhood |
BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | Neighborhood |
BP | GO:0000911 | cytokinesis by cell plate formation | IEP | Neighborhood |
CC | GO:0000932 | P-body | IEP | Neighborhood |
BP | GO:0001676 | long-chain fatty acid metabolic process | IEP | Neighborhood |
BP | GO:0003002 | regionalization | IEP | Neighborhood |
BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
MF | GO:0005034 | osmosensor activity | IEP | Neighborhood |
CC | GO:0005829 | cytosol | IEP | Neighborhood |
CC | GO:0005911 | cell-cell junction | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006473 | protein acetylation | IEP | Neighborhood |
BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
BP | GO:0007015 | actin filament organization | IEP | Neighborhood |
BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
BP | GO:0007155 | cell adhesion | IEP | Neighborhood |
BP | GO:0007623 | circadian rhythm | IEP | Neighborhood |
BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Neighborhood |
BP | GO:0009266 | response to temperature stimulus | IEP | Neighborhood |
BP | GO:0009292 | genetic transfer | IEP | Neighborhood |
BP | GO:0009294 | DNA mediated transformation | IEP | Neighborhood |
BP | GO:0009409 | response to cold | IEP | Neighborhood |
CC | GO:0009506 | plasmodesma | IEP | Neighborhood |
BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
BP | GO:0009606 | tropism | IEP | Neighborhood |
BP | GO:0009629 | response to gravity | IEP | Neighborhood |
BP | GO:0009630 | gravitropism | IEP | Neighborhood |
BP | GO:0009638 | phototropism | IEP | Neighborhood |
BP | GO:0009640 | photomorphogenesis | IEP | Neighborhood |
BP | GO:0009653 | anatomical structure morphogenesis | IEP | Neighborhood |
BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0009725 | response to hormone | IEP | Neighborhood |
BP | GO:0009733 | response to auxin | IEP | Neighborhood |
BP | GO:0009785 | blue light signaling pathway | IEP | Neighborhood |
BP | GO:0009791 | post-embryonic development | IEP | Neighborhood |
MF | GO:0009884 | cytokinin receptor activity | IEP | Neighborhood |
BP | GO:0009894 | regulation of catabolic process | IEP | Neighborhood |
BP | GO:0009909 | regulation of flower development | IEP | Neighborhood |
BP | GO:0009914 | hormone transport | IEP | Neighborhood |
BP | GO:0009926 | auxin polar transport | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0010048 | vernalization response | IEP | Neighborhood |
BP | GO:0010071 | root meristem specification | IEP | Neighborhood |
BP | GO:0010082 | regulation of root meristem growth | IEP | Neighborhood |
BP | GO:0010090 | trichome morphogenesis | IEP | Neighborhood |
BP | GO:0010091 | trichome branching | IEP | Neighborhood |
BP | GO:0010271 | regulation of chlorophyll catabolic process | IEP | Neighborhood |
BP | GO:0010311 | lateral root formation | IEP | Neighborhood |
BP | GO:0010315 | auxin efflux | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010540 | basipetal auxin transport | IEP | Neighborhood |
BP | GO:0010541 | acropetal auxin transport | IEP | Neighborhood |
BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Neighborhood |
BP | GO:0010638 | positive regulation of organelle organization | IEP | Neighborhood |
BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | Neighborhood |
BP | GO:0010959 | regulation of metal ion transport | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
BP | GO:0017148 | negative regulation of translation | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
BP | GO:0022610 | biological adhesion | IEP | Neighborhood |
CC | GO:0030054 | cell junction | IEP | Neighborhood |
BP | GO:0030522 | intracellular receptor signaling pathway | IEP | Neighborhood |
BP | GO:0030832 | regulation of actin filament length | IEP | Neighborhood |
BP | GO:0030833 | regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0031087 | deadenylation-independent decapping of nuclear-transcribed mRNA | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031329 | regulation of cellular catabolic process | IEP | Neighborhood |
BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0032271 | regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032273 | positive regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
BP | GO:0032502 | developmental process | IEP | Neighborhood |
BP | GO:0032506 | cytokinetic process | IEP | Neighborhood |
BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
BP | GO:0032870 | cellular response to hormone stimulus | IEP | Neighborhood |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Neighborhood |
BP | GO:0032970 | regulation of actin filament-based process | IEP | Neighborhood |
BP | GO:0032989 | cellular component morphogenesis | IEP | Neighborhood |
BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Neighborhood |
CC | GO:0034399 | nuclear periphery | IEP | Neighborhood |
BP | GO:0034756 | regulation of iron ion transport | IEP | Neighborhood |
BP | GO:0034757 | negative regulation of iron ion transport | IEP | Neighborhood |
BP | GO:0035278 | miRNA mediated inhibition of translation | IEP | Neighborhood |
CC | GO:0035770 | ribonucleoprotein granule | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
CC | GO:0036464 | cytoplasmic ribonucleoprotein granule | IEP | Neighborhood |
BP | GO:0040033 | negative regulation of translation, ncRNA-mediated | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043254 | regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0043271 | negative regulation of ion transport | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
MF | GO:0043424 | protein histidine kinase binding | IEP | Neighborhood |
BP | GO:0043473 | pigmentation | IEP | Neighborhood |
BP | GO:0043476 | pigment accumulation | IEP | Neighborhood |
BP | GO:0043478 | pigment accumulation in response to UV light | IEP | Neighborhood |
BP | GO:0043479 | pigment accumulation in tissues in response to UV light | IEP | Neighborhood |
BP | GO:0043480 | pigment accumulation in tissues | IEP | Neighborhood |
BP | GO:0043481 | anthocyanin accumulation in tissues in response to UV light | IEP | Neighborhood |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0044764 | multi-organism cellular process | IEP | Neighborhood |
BP | GO:0045010 | actin nucleation | IEP | Neighborhood |
BP | GO:0045596 | negative regulation of cell differentiation | IEP | Neighborhood |
BP | GO:0045974 | regulation of translation, ncRNA-mediated | IEP | Neighborhood |
BP | GO:0048281 | inflorescence morphogenesis | IEP | Neighborhood |
BP | GO:0048283 | indeterminate inflorescence morphogenesis | IEP | Neighborhood |
BP | GO:0048364 | root development | IEP | Neighborhood |
BP | GO:0048437 | floral organ development | IEP | Neighborhood |
BP | GO:0048440 | carpel development | IEP | Neighborhood |
BP | GO:0048497 | maintenance of floral organ identity | IEP | Neighborhood |
BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | Neighborhood |
BP | GO:0048509 | regulation of meristem development | IEP | Neighborhood |
BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | Neighborhood |
BP | GO:0048511 | rhythmic process | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
BP | GO:0048580 | regulation of post-embryonic development | IEP | Neighborhood |
BP | GO:0048827 | phyllome development | IEP | Neighborhood |
BP | GO:0048831 | regulation of shoot system development | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051051 | negative regulation of transport | IEP | Neighborhood |
BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | Neighborhood |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0060918 | auxin transport | IEP | Neighborhood |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0070085 | glycosylation | IEP | Neighborhood |
BP | GO:0070417 | cellular response to cold | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
BP | GO:0070887 | cellular response to chemical stimulus | IEP | Neighborhood |
BP | GO:0071215 | cellular response to abscisic acid stimulus | IEP | Neighborhood |
BP | GO:0071310 | cellular response to organic substance | IEP | Neighborhood |
BP | GO:0071322 | cellular response to carbohydrate stimulus | IEP | Neighborhood |
BP | GO:0071324 | cellular response to disaccharide stimulus | IEP | Neighborhood |
BP | GO:0071329 | cellular response to sucrose stimulus | IEP | Neighborhood |
BP | GO:0071365 | cellular response to auxin stimulus | IEP | Neighborhood |
BP | GO:0071396 | cellular response to lipid | IEP | Neighborhood |
BP | GO:0071483 | cellular response to blue light | IEP | Neighborhood |
BP | GO:0071495 | cellular response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
BP | GO:0080117 | secondary growth | IEP | Neighborhood |
BP | GO:0080190 | lateral growth | IEP | Neighborhood |
BP | GO:0090056 | regulation of chlorophyll metabolic process | IEP | Neighborhood |
BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0090700 | maintenance of plant organ identity | IEP | Neighborhood |
BP | GO:0097306 | cellular response to alcohol | IEP | Neighborhood |
BP | GO:0097435 | supramolecular fiber organization | IEP | Neighborhood |
BP | GO:0099402 | plant organ development | IEP | Neighborhood |
BP | GO:0110053 | regulation of actin filament organization | IEP | Neighborhood |
BP | GO:1901401 | regulation of tetrapyrrole metabolic process | IEP | Neighborhood |
BP | GO:1901404 | regulation of tetrapyrrole catabolic process | IEP | Neighborhood |
BP | GO:1902410 | mitotic cytokinetic process | IEP | Neighborhood |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Neighborhood |
BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Neighborhood |
BP | GO:1903047 | mitotic cell cycle process | IEP | Neighborhood |
BP | GO:1905393 | plant organ formation | IEP | Neighborhood |
BP | GO:1990064 | ground tissue pattern formation | IEP | Neighborhood |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | Neighborhood |
BP | GO:2000241 | regulation of reproductive process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |