AT3G22380 (TIC)


Aliases : TIC

Description : time for coffee


Gene families : OG0008373 (Archaeplastida) Phylogenetic Tree(s): OG0008373_tree ,
OG_05_0007356 (LandPlants) Phylogenetic Tree(s): OG_05_0007356_tree ,
OG_06_0004470 (SeedPlants) Phylogenetic Tree(s): OG_06_0004470_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22380
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00076200 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.TIC circadian... 0.08 Archaeplastida
GSVIVT01001149001 No alias Multi-process regulation.circadian clock.TIC circadian... 0.04 Archaeplastida
GSVIVT01017938001 No alias Multi-process regulation.circadian clock.TIC circadian... 0.09 Archaeplastida
Gb_04775 No alias circadian clock regulator (TIC) 0.08 Archaeplastida
MA_41397g0010 No alias circadian clock regulator (TIC) 0.03 Archaeplastida
Solyc09g075830.3.1 No alias circadian clock regulator (TIC) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009639 response to red or far red light RCA Interproscan
BP GO:0042752 regulation of circadian rhythm IMP Interproscan
BP GO:0042752 regulation of circadian rhythm RCA Interproscan
BP GO:0048574 long-day photoperiodism, flowering RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
CC GO:0000932 P-body IEP Neighborhood
BP GO:0001676 long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005034 osmosensor activity IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
MF GO:0009884 cytokinin receptor activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010071 root meristem specification IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010271 regulation of chlorophyll catabolic process IEP Neighborhood
BP GO:0010311 lateral root formation IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032870 cellular response to hormone stimulus IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
CC GO:0034399 nuclear periphery IEP Neighborhood
BP GO:0034756 regulation of iron ion transport IEP Neighborhood
BP GO:0034757 negative regulation of iron ion transport IEP Neighborhood
BP GO:0035278 miRNA mediated inhibition of translation IEP Neighborhood
CC GO:0035770 ribonucleoprotein granule IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Neighborhood
BP GO:0040033 negative regulation of translation, ncRNA-mediated IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0043271 negative regulation of ion transport IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
BP GO:0045974 regulation of translation, ncRNA-mediated IEP Neighborhood
BP GO:0048281 inflorescence morphogenesis IEP Neighborhood
BP GO:0048283 indeterminate inflorescence morphogenesis IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051051 negative regulation of transport IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070417 cellular response to cold IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071310 cellular response to organic substance IEP Neighborhood
BP GO:0071322 cellular response to carbohydrate stimulus IEP Neighborhood
BP GO:0071324 cellular response to disaccharide stimulus IEP Neighborhood
BP GO:0071329 cellular response to sucrose stimulus IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0071495 cellular response to endogenous stimulus IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:1990064 ground tissue pattern formation IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!