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  5. Zm00001e017660_P001

Zm00001e017660_P001


Description : no hits & (original description: none)


Gene families : OG0000255 (Archaeplastida) Phylogenetic Tree(s): OG0000255_tree ,
OG_05_0002826 (LandPlants) Phylogenetic Tree(s): OG_05_0002826_tree ,
OG_06_0002013 (SeedPlants) Phylogenetic Tree(s): OG_06_0002013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017660_P001
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00048p00106110 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
AT3G04980 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Archaeplastida
GSVIVT01017824001 No alias No description available 0.05 Archaeplastida
GSVIVT01028708001 No alias No description available 0.05 Archaeplastida
Gb_17193 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_21964 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g27740.3 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g30620.3 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g28310.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g31940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34440.1 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_10434613g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_137848g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_96489g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g27530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_2560V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
Smo122991 No alias No description available 0.02 Archaeplastida
Solyc01g098250.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc05g040050.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g047690.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g029220.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR024593 DUF3444 711 873
IPR024593 DUF3444 406 609
IPR001623 DnaJ_domain 66 127
No external refs found!