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  5. AT3G22490

AT3G22490


Description : Seed maturation protein


Gene families : OG0001382 (Archaeplastida) Phylogenetic Tree(s): OG0001382_tree ,
OG_05_0002277 (LandPlants) Phylogenetic Tree(s): OG_05_0002277_tree ,
OG_06_0002008 (SeedPlants) Phylogenetic Tree(s): OG_06_0002008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22490
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AT1G03120 RAB28, ATRAB28 responsive to abscisic acid 28 0.03 Archaeplastida
GSVIVT01001170001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.13 Archaeplastida
GSVIVT01017985001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.2 Archaeplastida
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.21 Archaeplastida
Gb_18212 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.04 Archaeplastida
LOC_Os03g06360.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.2 Archaeplastida
LOC_Os03g53610.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.12 Archaeplastida
LOC_Os03g53620.1 No alias no hits & (original description: none) 0.2 Archaeplastida
LOC_Os06g23350.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.17 Archaeplastida
LOC_Os10g29570.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os12g43140.1 No alias no hits & (original description: none) 0.2 Archaeplastida
MA_14118g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_216273g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_326206g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_49897g0020 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c25_10310V3.1 No alias Seed maturation protein 0.03 Archaeplastida
Pp3c6_200V3.1 No alias Seed maturation protein 0.02 Archaeplastida
Smo84789 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc09g065360.4.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.17 Archaeplastida
Solyc09g082100.3.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.18 Archaeplastida
Solyc09g082110.4.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.16 Archaeplastida
Zm00001e000449_P001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.15 Archaeplastida
Zm00001e005665_P002 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.15 Archaeplastida
Zm00001e005666_P001 No alias no hits & (original description: none) 0.15 Archaeplastida
Zm00001e014959_P001 No alias no hits & (original description: none) 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0009793 embryo development ending in seed dormancy ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Neighborhood
MF GO:0004462 lactoylglutathione lyase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP Neighborhood
MF GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006108 malate metabolic process IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006829 zinc ion transport IEP Neighborhood
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008379 thioredoxin peroxidase activity IEP Neighborhood
MF GO:0008429 phosphatidylethanolamine binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010231 maintenance of seed dormancy IEP Neighborhood
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP Neighborhood
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Neighborhood
BP GO:0010344 seed oilbody biogenesis IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016145 S-glycoside catabolic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016595 glutamate binding IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019430 removal of superoxide radicals IEP Neighborhood
BP GO:0019759 glycosinolate catabolic process IEP Neighborhood
BP GO:0019762 glucosinolate catabolic process IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
CC GO:0031354 intrinsic component of plastid outer membrane IEP Neighborhood
CC GO:0031355 integral component of plastid outer membrane IEP Neighborhood
CC GO:0031358 intrinsic component of chloroplast outer membrane IEP Neighborhood
CC GO:0031359 integral component of chloroplast outer membrane IEP Neighborhood
BP GO:0032958 inositol phosphate biosynthetic process IEP Neighborhood
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
CC GO:0042807 central vacuole IEP Neighborhood
BP GO:0043200 response to amino acid IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048700 acquisition of desiccation tolerance in seed IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0050898 nitrile metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Neighborhood
MF GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0071614 linoleic acid epoxygenase activity IEP Neighborhood
MF GO:0072555 17-beta-ketosteroid reductase activity IEP Neighborhood
MF GO:0072582 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0080028 nitrile biosynthetic process IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0097437 maintenance of dormancy IEP Neighborhood
BP GO:0097439 acquisition of desiccation tolerance IEP Neighborhood
BP GO:0098869 cellular oxidant detoxification IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1990748 cellular detoxification IEP Neighborhood
InterPro domains Description Start Stop
IPR007011 SMP 136 192
IPR007011 SMP 14 68
IPR007011 SMP 201 260
No external refs found!