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  5. Zm00001e018000_P001

Zm00001e018000_P001


Description : cyclin (CYCD)


Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0007410 (LandPlants) Phylogenetic Tree(s): OG_05_0007410_tree ,
OG_06_0004640 (SeedPlants) Phylogenetic Tree(s): OG_06_0004640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018000_P001
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.03 Archaeplastida
GSVIVT01000451001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.1 Archaeplastida
GSVIVT01006022001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
LOC_Os07g37010.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os11g47950.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Solyc01g107730.3.1 No alias cyclin (CYCD) 0.05 Archaeplastida
Solyc12g088650.2.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000123 positive regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 195 318
IPR006671 Cyclin_N 91 192
No external refs found!