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  5. Zm00001e018123_P001

Zm00001e018123_P001


Description : cationic amino acid transporter (CAT)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0000855 (LandPlants) Phylogenetic Tree(s): OG_05_0000855_tree ,
OG_06_0000604 (SeedPlants) Phylogenetic Tree(s): OG_06_0000604_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018123_P001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00049320 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01003684001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
LOC_Os06g34830.1 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
MA_10433667g0010 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
MA_11267g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g21920.1 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Pp3c23_19350V3.1 No alias amino acid transporter 1 0.03 Archaeplastida
Pp3c5_24930V3.1 No alias cationic amino acid transporter 6 0.02 Archaeplastida
Zm00001e005030_P001 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 71 442
IPR029485 CAT_C 514 564
No external refs found!