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  5. Zm00001e018193_P002

Zm00001e018193_P002


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018193_P002
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00091p00025820 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.03 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.03 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.02 Archaeplastida
Cpa|evm.model.tig00020780.48 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g13310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g56090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10428459g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_199974g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g053610.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020963_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029601_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 46 93
IPR001005 SANT/Myb 99 142
No external refs found!