AT3G22930 (CML11)

Aliases : CML11

Description : calmodulin-like 11

Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0047304 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042074 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G22930
Cluster	HCCA: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
Gb_04333	No alias	Probable calcium-binding protein CML10 OS=Oryza sativa...	0.02	Archaeplastida
Gb_30178	No alias	Calmodulin-like protein 6 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc01g005370.3.1	No alias	Probable calcium-binding protein CML25 OS=Arabidopsis...	0.01	Archaeplastida
Solyc03g098050.3.1	No alias	Calmodulin OS=Solanum lycopersicum (sp\|p27161\|calm_sollc : 234.0)	0.01	Archaeplastida
Solyc04g018110.1.1	No alias	Probable calcium-binding protein CML35 OS=Arabidopsis...	0.02	Archaeplastida
Solyc10g074740.2.1	No alias	Calcium-binding protein CAST OS=Solanum tuberosum...	0.02	Archaeplastida
Zm00001e009213_P001	No alias	Putative calmodulin-like protein 2 OS=Oryza sativa...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISS	Interproscan
BP	GO:0006928	movement of cell or subcellular component	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051645	Golgi localization	RCA	Interproscan
BP	GO:0051646	mitochondrion localization	RCA	Interproscan
BP	GO:0060151	peroxisome localization	RCA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Neighborhood
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Neighborhood
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005351	carbohydrate:proton symporter activity	IEP	Neighborhood
MF	GO:0005402	carbohydrate:cation symporter activity	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
BP	GO:0005986	sucrose biosynthetic process	IEP	Neighborhood
BP	GO:0006278	RNA-dependent DNA biosynthetic process	IEP	Neighborhood
BP	GO:0006349	regulation of gene expression by genetic imprinting	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0007015	actin filament organization	IEP	Neighborhood
BP	GO:0007131	reciprocal meiotic recombination	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0007155	cell adhesion	IEP	Neighborhood
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Neighborhood
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009943	adaxial/abaxial axis specification	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010358	leaf shaping	IEP	Neighborhood
BP	GO:0010638	positive regulation of organelle organization	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015114	phosphate ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015293	symporter activity	IEP	Neighborhood
MF	GO:0015294	solute:cation symporter activity	IEP	Neighborhood
MF	GO:0015295	solute:proton symporter activity	IEP	Neighborhood
BP	GO:0016036	cellular response to phosphate starvation	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
BP	GO:0019374	galactolipid metabolic process	IEP	Neighborhood
BP	GO:0019375	galactolipid biosynthetic process	IEP	Neighborhood
BP	GO:0022610	biological adhesion	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
BP	GO:0030832	regulation of actin filament length	IEP	Neighborhood
BP	GO:0030833	regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0030838	positive regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
BP	GO:0031334	positive regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032271	regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032273	positive regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0032970	regulation of actin filament-based process	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
BP	GO:0035825	homologous recombination	IEP	Neighborhood
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
MF	GO:0042803	protein homodimerization activity	IEP	Neighborhood
BP	GO:0043254	regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0044030	regulation of DNA methylation	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
BP	GO:0045010	actin nucleation	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Neighborhood
MF	GO:0052731	phosphocholine phosphatase activity	IEP	Neighborhood
MF	GO:0052732	phosphoethanolamine phosphatase activity	IEP	Neighborhood
BP	GO:0070588	calcium ion transmembrane transport	IEP	Neighborhood
BP	GO:0071435	potassium ion export	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071514	genetic imprinting	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
BP	GO:0071897	DNA biosynthetic process	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0097435	supramolecular fiber organization	IEP	Neighborhood
BP	GO:0110053	regulation of actin filament organization	IEP	Neighborhood
MF	GO:1901683	arsenate ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901684	arsenate ion transmembrane transport	IEP	Neighborhood
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	36	96
IPR002048	EF_hand_dom	106	169

External Links

No external refs found!

AT3G22930 (CML11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation