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  5. AT3G22940

AT3G22940


Description : F-box associated ubiquitination effector family protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22940
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT1G25141 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.04 Archaeplastida
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G03405 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17500 No alias F-box family protein 0.03 Archaeplastida
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G19560 No alias F-box family protein 0.04 Archaeplastida
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G21165 No alias No description available 0.04 Archaeplastida
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
MF GO:0015085 calcium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015368 calcium:cation antiporter activity IEP Neighborhood
MF GO:0015491 cation:cation antiporter activity IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 200 362
No external refs found!