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  5. AT3G23260

AT3G23260


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G23260
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008419 RNA lariat debranching enzyme activity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP Neighborhood
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 200 357
IPR001810 F-box_dom 2 39
No external refs found!