Zm00001e018761_P001


Description : transcription factor (ARF)


Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0002311 (SeedPlants) Phylogenetic Tree(s): OG_06_0002311_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018761_P001
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020904.93 No alias No description available 0.01 Archaeplastida
GSVIVT01020805001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
LOC_Os02g35140.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os02g46710.1 No alias Auxin response factor 12 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
Pp3c4_13010V3.1 No alias auxin response factor 16 0.03 Archaeplastida
Solyc01g103050.3.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc03g031970.4.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Solyc07g016180.3.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e006640_P002 No alias transcription factor (ARF) 0.06 Archaeplastida
Zm00001e025163_P001 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e032135_P002 No alias transcription factor (ARF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 128 229
IPR010525 Auxin_resp 254 335
IPR033389 AUX/IAA_dom 730 775
IPR033389 AUX/IAA_dom 673 726
No external refs found!