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Description : transcription factor (TCP). TCP20 circadian clock activation factor
Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e018800_P001 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00257890 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | Archaeplastida | |
| LOC_Os01g69980.1 | No alias | transcription factor (TCP). TCP20 circadian clock... | 0.02 | Archaeplastida | |
| LOC_Os08g43160.1 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida | |
| MA_10428794g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_762628g0010 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Mp7g09490.1 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Pp3c10_20400V3.1 | No alias | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 | 0.02 | Archaeplastida | |
| Smo438214 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | Archaeplastida | |
| Solyc08g080150.1.1 | No alias | transcription factor (TCP) | 0.04 | Archaeplastida | |
| Zm00001e040592_P001 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Neighborhood |
| CC | GO:0000813 | ESCRT I complex | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0006534 | cysteine metabolic process | IEP | Neighborhood |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Neighborhood |
| BP | GO:0006563 | L-serine metabolic process | IEP | Neighborhood |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Neighborhood |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0010011 | auxin binding | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Neighborhood |
| CC | GO:0036452 | ESCRT complex | IEP | Neighborhood |
| MF | GO:0042562 | hormone binding | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044440 | endosomal part | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 101 | 171 |
| No external refs found! |