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  5. Zm00001e018885_P005

Zm00001e018885_P005


Description : pre-mRNA splicing regulator (DDX5)


Gene families : OG0000695 (Archaeplastida) Phylogenetic Tree(s): OG0000695_tree ,
OG_05_0003605 (LandPlants) Phylogenetic Tree(s): OG_05_0003605_tree ,
OG_06_0003577 (SeedPlants) Phylogenetic Tree(s): OG_06_0003577_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018885_P005

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017651001 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_23629 No alias pre-mRNA splicing regulator (DDX5) 0.04 Archaeplastida
Mp4g22900.1 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g057760.4.1 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 451 560
IPR011545 DEAD/DEAH_box_helicase_dom 244 414
No external refs found!