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  5. Zm00001e018954_P001

Zm00001e018954_P001


Description : Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana (sp|o80588|ede1_arath : 114.0)


Gene families : OG0000642 (Archaeplastida) Phylogenetic Tree(s): OG0000642_tree ,
OG_05_0000381 (LandPlants) Phylogenetic Tree(s): OG_05_0000381_tree ,
OG_06_0000548 (SeedPlants) Phylogenetic Tree(s): OG_06_0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018954_P001
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00037320 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.11 Archaeplastida
AT2G44190 EDE1, QWRF5 Family of unknown function (DUF566) 0.03 Archaeplastida
LOC_Os10g20510.1 No alias Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_11175g0010 No alias AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_46842g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c23_22010V3.1 No alias Family of unknown function (DUF566) 0.02 Archaeplastida
Solyc01g096840.3.1 No alias accessory component EDE1 of Augmin gamma-TuRC recruiting complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR007573 QWRF 124 457
No external refs found!