Zm00001e019004_P002


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019004_P002
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00227160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AMTR_s00021p00187850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AMTR_s00076p00127530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.06 Archaeplastida
AT1G31320 LBD4 LOB domain-containing protein 4 0.03 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.07 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.03 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.04 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.04 Archaeplastida
AT5G63090 LOB Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida
GSVIVT01003546001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01004323001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01006269001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01008080001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01016330001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01016334001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01016335001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_03653 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_08465 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_13424 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_16914 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_19384 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_21467 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Gb_23794 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_29853 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g14030.1 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
LOC_Os01g66590.2 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10430986g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10432553g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10434193g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_10434782g0020 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_16646g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_290245g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_292200g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc03g095940.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc05g048740.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g071660.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 33 129
No external refs found!