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  5. Zm00001e019038_P001

Zm00001e019038_P001


Description : Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana (sp|q9si53|pp147_arath : 309.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000024 (SeedPlants) Phylogenetic Tree(s): OG_06_0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019038_P001

Target Alias Description ECC score Gene Family Method Actions
Gb_02086 No alias RNA editing factor (OTP82) 0.08 Archaeplastida
Gb_11981 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.11 Archaeplastida
LOC_Os07g31000.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 187 210
IPR002885 Pentatricopeptide_repeat 288 310
IPR002885 Pentatricopeptide_repeat 114 144
IPR032867 DYW_dom 386 466
IPR002885 Pentatricopeptide_repeat 213 259
IPR002885 Pentatricopeptide_repeat 9 47
No external refs found!