Description : Pentatricopeptide repeat-containing protein At3g21470 OS=Arabidopsis thaliana (sp|q9lvf9|pp245_arath : 442.0)
Gene families : OG0005064 (Archaeplastida) Phylogenetic Tree(s): OG0005064_tree ,
OG_05_0011427 (LandPlants) Phylogenetic Tree(s): OG_05_0011427_tree ,
OG_06_0011525 (SeedPlants) Phylogenetic Tree(s): OG_06_0011525_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e019067_P001 | |
Cluster | HCCA: Cluster_158 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G51320 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
AT5G37570 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.11 | Archaeplastida | |
GSVIVT01029336001 | No alias | Pentatricopeptide repeat-containing protein At1g74630... | 0.04 | Archaeplastida | |
LOC_Os01g65840.1 | No alias | Pentatricopeptide repeat-containing protein At3g21470... | 0.07 | Archaeplastida | |
LOC_Os02g41560.1 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | Archaeplastida | |
LOC_Os04g33840.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
LOC_Os05g01635.1 | No alias | Pentatricopeptide repeat-containing protein At3g51320... | 0.1 | Archaeplastida | |
MA_29579g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | Archaeplastida | |
Solyc08g079640.3.1 | No alias | Pentatricopeptide repeat-containing protein At3g51320... | 0.09 | Archaeplastida | |
Solyc11g006940.3.1 | No alias | component Sm-G of U1/U2/U4/U5-associated Sm accessory... | 0.05 | Archaeplastida | |
Solyc11g012570.3.1 | No alias | Pentatricopeptide repeat-containing protein At3g51320... | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 123 | 150 |
IPR002885 | Pentatricopeptide_repeat | 421 | 447 |
IPR002885 | Pentatricopeptide_repeat | 95 | 122 |
IPR002885 | Pentatricopeptide_repeat | 154 | 177 |
IPR002885 | Pentatricopeptide_repeat | 187 | 215 |
IPR002885 | Pentatricopeptide_repeat | 348 | 394 |
IPR002885 | Pentatricopeptide_repeat | 247 | 294 |
No external refs found! |