Zm00001e019254_P001


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0000376 (SeedPlants) Phylogenetic Tree(s): OG_06_0000376_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019254_P001
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00247840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00045p00040070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00074p00097250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G19000 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G10595 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT4G09450 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.08 Archaeplastida
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
AT5G23650 No alias Homeodomain-like transcriptional regulator 0.03 Archaeplastida
AT5G47290 No alias myb family transcription factor 0.02 Archaeplastida
Cpa|evm.model.tig00000455.6 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014754001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01034001001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_05002 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Gb_28292 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Gb_28483 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Gb_38078 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os01g41900.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g44390.2 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.07 Archaeplastida
LOC_Os01g64360.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os03g62100.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g37060.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os06g07640.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os08g04840.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os10g41200.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_10433265g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_254136g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_867875g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_908g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Smo439294 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc04g080500.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc09g014250.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc11g071500.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc12g089170.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e016939_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e017388_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e025446_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028729_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e042486_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 135 179
IPR001005 SANT/Myb 33 78
No external refs found!