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  5. Zm00001e019433_P001

Zm00001e019433_P001


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019433_P001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00077p00060330 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.11 Archaeplastida
AMTR_s00119p00058870 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.04 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.07 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.04 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.02 Archaeplastida
AT4G38210 ATEXPA20,... expansin A20 0.05 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.02 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_06139 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.06 Archaeplastida
Gb_11024 No alias Expansin-A10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os01g60770.1 No alias alpha-class expansin 0.2 Archaeplastida
LOC_Os02g16809.1 No alias alpha-class expansin 0.08 Archaeplastida
LOC_Os03g06010.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10299189g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_40637g0020 No alias alpha-class expansin 0.03 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_6583g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_792493g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.01 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g03890.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.01 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.01 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.01 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Smo236978 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.1 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Solyc03g115345.1.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.1 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc06g005560.4.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e029193_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e029218_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 162 239
IPR009009 RlpA-like_DPBB 66 151
No external refs found!