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  5. AT3G23955

AT3G23955


Description : F-box family protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G23955
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT1G32020 No alias F-box family protein 0.04 Archaeplastida
AT1G60410 No alias F-box family protein 0.05 Archaeplastida
AT1G66640 No alias RNI-like superfamily protein 0.03 Archaeplastida
AT1G78750 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT1G80470 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G44940 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.06 Archaeplastida
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005801 cis-Golgi network IEP Neighborhood
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Neighborhood
BP GO:0006312 mitotic recombination IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0051568 histone H3-K4 methylation IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 61 94
IPR006566 FBD 327 371
No external refs found!