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  5. AT1G13960

AT1G13960 (WRKY4)


Aliases : WRKY4

Description : WRKY DNA-binding protein 4


Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000250 (LandPlants) Phylogenetic Tree(s): OG_05_0000250_tree ,
OG_06_0002852 (SeedPlants) Phylogenetic Tree(s): OG_06_0002852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13960
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
AMTR_s00003p00229970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
AMTR_s00004p00067720 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AMTR_s00019p00249020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AMTR_s00023p00102530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AMTR_s00058p00090300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AMTR_s00065p00201230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
AMTR_s00077p00103880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AMTR_s00130p00044000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AMTR_s00156p00038330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AT1G64000 WRKY56, ATWRKY56 WRKY DNA-binding protein 56 0.04 Archaeplastida
AT1G66600 ABO3, WRKY63, ATWRKY63 ABA overly sensitive mutant 3 0.03 Archaeplastida
AT2G30250 ATWRKY25, WRKY25 WRKY DNA-binding protein 25 0.03 Archaeplastida
AT4G01250 WRKY22, AtWRKY22 WRKY family transcription factor 0.03 Archaeplastida
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.03 Archaeplastida
AT4G31550 ATWRKY11, WRKY11 WRKY DNA-binding protein 11 0.07 Archaeplastida
AT4G31800 WRKY18, ATWRKY18 WRKY DNA-binding protein 18 0.06 Archaeplastida
GSVIVT01008046001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01010525001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01019419001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01020864001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
GSVIVT01021252001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.05 Archaeplastida
GSVIVT01022245001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
GSVIVT01024624001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
GSVIVT01028129001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01028244001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
GSVIVT01030453001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01032661001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01033063001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01033194001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.05 Archaeplastida
GSVIVT01033195001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.05 Archaeplastida
GSVIVT01034148001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
GSVIVT01035884001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.05 Archaeplastida
GSVIVT01035885001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
Gb_01873 No alias transcription factor (WRKY) 0.03 Archaeplastida
Gb_02625 No alias transcription factor (WRKY) 0.03 Archaeplastida
Gb_06156 No alias transcription factor (WRKY) 0.03 Archaeplastida
Gb_08731 No alias transcription factor (WRKY) 0.05 Archaeplastida
Gb_23334 No alias transcription factor (WRKY) 0.02 Archaeplastida
Gb_25118 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.04 Archaeplastida
Gb_39366 No alias transcription factor (WRKY) 0.02 Archaeplastida
Gb_40207 No alias transcription factor (WRKY) 0.03 Archaeplastida
Gb_40257 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os01g09080.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
LOC_Os01g14440.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os01g47560.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os01g53040.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os01g60490.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os01g61080.1 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.02 Archaeplastida
LOC_Os01g74140.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os02g53100.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
LOC_Os03g20550.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os03g21710.1 No alias transcription factor (WRKY) 0.05 Archaeplastida
LOC_Os04g50920.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os05g09020.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
LOC_Os05g39720.1 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.06 Archaeplastida
LOC_Os05g45230.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
LOC_Os09g25060.1 No alias transcription factor (WRKY) 0.07 Archaeplastida
LOC_Os09g25070.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
LOC_Os11g02480.2 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os11g29870.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os12g02420.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_10434651g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_10436931g0050 No alias transcription factor (WRKY) 0.02 Archaeplastida
MA_212937g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_310991g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_381058g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_47307g0010 No alias transcription factor (WRKY) 0.02 Archaeplastida
MA_53351g0010 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_83250g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g16800.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Pp3c14_17020V3.1 No alias WRKY DNA-binding protein 7 0.02 Archaeplastida
Pp3c4_26880V3.1 No alias WRKY DNA-binding protein 57 0.02 Archaeplastida
Smo147026 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
Smo81371 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
Solyc01g095100.4.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc01g095630.3.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc01g104550.3.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
Solyc02g032950.3.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc02g072190.4.1 No alias No annotation 0.04 Archaeplastida
Solyc02g080890.3.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc02g088340.4.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc02g094270.2.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc03g116890.3.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc04g051690.4.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc04g072070.3.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
Solyc04g078550.3.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
Solyc05g012500.3.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc06g048870.3.1 No alias transcription factor (WRKY) 0.06 Archaeplastida
Solyc06g066370.4.1 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.04 Archaeplastida
Solyc06g068460.3.1 No alias transcription factor (WRKY) 0.05 Archaeplastida
Solyc07g056280.3.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
Solyc08g006320.4.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc08g008280.3.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
Solyc08g067340.4.1 No alias transcription factor (WRKY) 0.05 Archaeplastida
Solyc08g067360.3.1 No alias transcription factor (WRKY) 0.06 Archaeplastida
Solyc08g081630.2.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc09g014990.4.1 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.05 Archaeplastida
Solyc10g007970.2.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc10g009550.3.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Solyc10g011910.4.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e002502_P001 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e005732_P002 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e010647_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e011098_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e013838_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016343_P002 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e016623_P001 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e017439_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e019418_P001 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.03 Archaeplastida
Zm00001e019908_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e019977_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e020229_P002 No alias transcription factor (WRKY) 0.05 Archaeplastida
Zm00001e020410_P001 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e024807_P002 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e027140_P002 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.03 Archaeplastida
Zm00001e027301_P001 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e027460_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e027702_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e028011_P002 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e029092_P002 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e030443_P001 No alias transcription factor (WRKY) 0.04 Archaeplastida
Zm00001e031518_P004 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.02 Archaeplastida
Zm00001e032189_P001 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e037631_P001 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e038062_P002 No alias transcription factor (WRKY) 0.02 Archaeplastida
Zm00001e042185_P001 No alias transcription factor (WRKY). transcription factor (WRKY33) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0002020 protease binding IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003958 NADPH-hemoprotein reductase activity IEP Neighborhood
MF GO:0004034 aldose 1-epimerase activity IEP Neighborhood
MF GO:0004352 glutamate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004353 glutamate dehydrogenase [NAD(P)+] activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015193 L-proline transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016208 AMP binding IEP Neighborhood
CC GO:0016363 nuclear matrix IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033609 oxalate metabolic process IEP Neighborhood
BP GO:0033611 oxalate catabolic process IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043270 positive regulation of ion transport IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043649 dicarboxylic acid catabolic process IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
MF GO:0050203 oxalate-CoA ligase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051924 regulation of calcium ion transport IEP Neighborhood
BP GO:0051928 positive regulation of calcium ion transport IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR003657 WRKY_dom 409 466
IPR003657 WRKY_dom 229 285
No external refs found!